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Run command line from Qt app in linux

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  • G Offline
    G Offline
    grullo
    wrote on 13 Apr 2020, 18:45 last edited by
    #7

    Thank you very much JoB!

    I will try that later, because I need to have a beta version working by the end of the week.

    Unfortunately, I have other problem and I need your advise again... (sorry I'm new in Qt).

    My previous doubt was how to run a command line in a shell. Now my problem is the "same", but I need to run my own program. What I did: Easy, just substituting the "ls -l" by the command to execute my program. But... but program requires to load some libraries... so what I do is

    //Load the libraries (it is a script)
    QProcess proc;
    QString Command = " . /home/grullo/xmip/xmipp.bashrc;
    proc.start(Command);
    proc.waitForFinished();

    //Now I launch my script
    Command = "myscript";
    proc.start(Command);
    proc.waitForFinished();
    QString StdOut = proc.readAllStandardOutput(); //Reads standard output

    cout<<"\n Printing the standard output..........\n";
    cout<<endl<<StdOut.toStdString();
    cout<<"\n Printing the standard error..........\n";
    QString StdError = proc.readAllStandardError(); //Reads standard error
    cout<<endl<<StdError.toStdString();

    If I lauch my script in command line I get an output in the terminal. But not with Qt program. Also I checked and the script never was executed! Am I doing anything wrong?

    Thanks in advance and sorry I don't want to bother other people with my code

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    • S Offline
      S Offline
      SGaist
      Lifetime Qt Champion
      wrote on 13 Apr 2020, 18:46 last edited by
      #8

      Where is your "myscript" located ?

      Interested in AI ? www.idiap.ch
      Please read the Qt Code of Conduct - https://forum.qt.io/topic/113070/qt-code-of-conduct

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      • G Offline
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        grullo
        wrote on 13 Apr 2020, 20:33 last edited by
        #9

        Thanks SGaist

        myscript is a file that makes use of the libraries loaded with xmip.bashrc

        In fact, fact my post I tried to run myscript providing the absolute path. I mean

        QProcess proc;
        QString Command = " /home/grullo/xmip/build/myscript";
        proc.start(Command);

        Then an error in the StdError appeared " error while loading shared libraries" that suggest me that the loaded libraries (by the first start process) are not available in the second start process. I think that the start processes are independent each other. I cannot load libraries for the second one. Currently the alternative I'm thinking is to create a bash script with all I need to do. Then I will run that script with just one start process.

        I am correct with the idea of independent process?

        Thanks in advacne

        P 1 Reply Last reply 13 Apr 2020, 21:02
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        • S Offline
          S Offline
          SGaist
          Lifetime Qt Champion
          wrote on 13 Apr 2020, 20:36 last edited by
          #10

          Yes you are because they are completely unrelated.

          Interested in AI ? www.idiap.ch
          Please read the Qt Code of Conduct - https://forum.qt.io/topic/113070/qt-code-of-conduct

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          • G grullo
            13 Apr 2020, 20:33

            Thanks SGaist

            myscript is a file that makes use of the libraries loaded with xmip.bashrc

            In fact, fact my post I tried to run myscript providing the absolute path. I mean

            QProcess proc;
            QString Command = " /home/grullo/xmip/build/myscript";
            proc.start(Command);

            Then an error in the StdError appeared " error while loading shared libraries" that suggest me that the loaded libraries (by the first start process) are not available in the second start process. I think that the start processes are independent each other. I cannot load libraries for the second one. Currently the alternative I'm thinking is to create a bash script with all I need to do. Then I will run that script with just one start process.

            I am correct with the idea of independent process?

            Thanks in advacne

            P Offline
            P Offline
            Pablo J. Rogina
            wrote on 13 Apr 2020, 21:02 last edited by Pablo J. Rogina
            #11

            @grullo said in Run command line from Qt app in linux:

            //Load the libraries (it is a script)

            More than loading the libraries, it seems to me that you're setting the environment for such libraries to be found/used, setting the path, seeting some environment variables, etc. right?.

            So I imagine you can run the first command (.bashrc script) and just grab the system environment just after it via QProcessEnvironment::systemEnvironment().

            Then, use that QProcessEnvironment object that you received and used it to set the environment of the second process via QProcess::setProcessEnvironment

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            J 1 Reply Last reply 13 Apr 2020, 21:54
            1
            • P Pablo J. Rogina
              13 Apr 2020, 21:02

              @grullo said in Run command line from Qt app in linux:

              //Load the libraries (it is a script)

              More than loading the libraries, it seems to me that you're setting the environment for such libraries to be found/used, setting the path, seeting some environment variables, etc. right?.

              So I imagine you can run the first command (.bashrc script) and just grab the system environment just after it via QProcessEnvironment::systemEnvironment().

              Then, use that QProcessEnvironment object that you received and used it to set the environment of the second process via QProcess::setProcessEnvironment

              J Offline
              J Offline
              JonB
              wrote on 13 Apr 2020, 21:54 last edited by JonB
              #12

              @Pablo-J-Rogina
              It might depend exactly what you mean, but I don't think it can work. You cannot run the .bashrc as a QProcess from a Qt program and then use QProcessEnvironment::systemEnvironment() to access the environment which was created in the sub-shell. The systemEnvironment function returns the environment of the calling process (your Qt program), not that of the called bash which interprets the .bashrc file.

              @grullo
              Let us assume @Pablo-J-Rogina 's hunch is correct that you need the environment variables created in xmipp.bashrc to be set when running your myscript.

              Because you presently execute these two files as separate processes, your second command will not inherit anything from executing your first command.

              What you may be looking for, try

              proc.start("bash", QStringList() << "-c" << ". /home/grullo/xmip/xmipp.bashrc;  /home/grullo/xmip/build/myscript");
              

              or

              proc.start("bash", QStringList() << "-c" << "source /home/grullo/xmip/xmipp.bashrc;  /home/grullo/xmip/build/myscript");
              

              Or, it is possible you could edit /home/grullo/xmip/build/myscript to go source /home/grullo/xmip/xmipp.bashrc as the first thing it does, and then you may able to execute myscript alone from your Qt program.

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              • G Offline
                G Offline
                grullo
                wrote on 13 Apr 2020, 22:50 last edited by
                #13

                @Pablo-J-Rogina

                Thank's for your reply, what you said is exactly what it is. First I set some enviroments variables, to be used by the script.

                What I could do is to create the shell script by code , and then call with the start the created script. This worked, but I know that's not a good or a very elegant solution.

                Then I saw the @JonB solution, and I tested it. It works properly, and its the right solution (not mine dirty script solution) Thanks!. In fact what you propose I tried it without the bash -c, I think that's critical. Good to know it

                Anyway I will spend some time trying to set the enviroment as @Pablo-J-Rogina suggested, just to learn.

                Now I will try to read in real time the standardOutput.

                Thank you to everyone!

                P 1 Reply Last reply 14 Apr 2020, 01:09
                0
                • G grullo
                  13 Apr 2020, 22:50

                  @Pablo-J-Rogina

                  Thank's for your reply, what you said is exactly what it is. First I set some enviroments variables, to be used by the script.

                  What I could do is to create the shell script by code , and then call with the start the created script. This worked, but I know that's not a good or a very elegant solution.

                  Then I saw the @JonB solution, and I tested it. It works properly, and its the right solution (not mine dirty script solution) Thanks!. In fact what you propose I tried it without the bash -c, I think that's critical. Good to know it

                  Anyway I will spend some time trying to set the enviroment as @Pablo-J-Rogina suggested, just to learn.

                  Now I will try to read in real time the standardOutput.

                  Thank you to everyone!

                  P Offline
                  P Offline
                  Pablo J. Rogina
                  wrote on 14 Apr 2020, 01:09 last edited by
                  #14

                  @grullo said in Run command line from Qt app in linux:

                  Anyway I will spend some time trying to set the enviroment as @Pablo-J-Rogina suggested, just to learn.

                  Save time! My approach won't work
                  @JonB was exactly right. QProcess::systemEnvironment() returns the environment of the Qt app, i.e. the calling process and no sub-process can change the parent environment. That's why you need to source the initial script to alter the environment, since source is a shell built-in command that doesn't create another process...

                  Upvote the answer(s) that helped you solve the issue
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                  • G Offline
                    G Offline
                    grullo
                    wrote on 15 Apr 2020, 00:49 last edited by
                    #15

                    Thank you anyway @Pablo-J-Rogina.

                    Now I'm able to run scripts, I'm trying to read in real time the standard output. I'm finding some problems, but I will keep fighting them by myself. If for tomorrow I'm not able I will ask you help

                    Thank you everybody!

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                    • G Offline
                      G Offline
                      grullo
                      wrote on 20 Apr 2020, 22:23 last edited by grullo
                      #16

                      Dear all,

                      I continue fighting with my app... and I reached a point in which I'm stuck... Of course is again with the issue of launching a shell script. When I click on a button, the app launches an script. However, the script never finish, and always appears this error:

                      standard Error:
                      QProcess: Destroyed while process ("bash") is still running.

                      If I run the script outside of Qt it finishes.

                      I copy here the code I have, just if it helps

                      QProcess proc;
                      proc.setWorkingDirectory("/home/grullo/isoXmipp/");
                      QString cmdline = ". /home/grullo/xmip-bundle/build/xmipp.bashrc";
                      QString xmipCmdLine;
                      createXmippScript(xmipCmdLine);
                      cmdline = cmdline + "; " + xmipCmdLine;
                      std::cout << cmdline.toStdString() << std::endl;
                      proc.start("bash", QStringList() << "-c" <<cmdline);
                      proc.waitForFinished();

                      QString StdOut = proc.readAllStandardOutput(); //Reads standard output
                      ui->consoleOutput->setText(StdOut);
                      cout<<"\n standard output..........\n";
                      cout<<endl<<StdOut.toStdString();

                      cout<<"\n standard error..........\n";
                      QString StdError = proc.readAllStandardError(); //Reads standard error
                      cout<<endl<<StdError.toStdString();

                      Thanks in advance

                      P 1 Reply Last reply 21 Apr 2020, 01:31
                      0
                      • G grullo
                        20 Apr 2020, 22:23

                        Dear all,

                        I continue fighting with my app... and I reached a point in which I'm stuck... Of course is again with the issue of launching a shell script. When I click on a button, the app launches an script. However, the script never finish, and always appears this error:

                        standard Error:
                        QProcess: Destroyed while process ("bash") is still running.

                        If I run the script outside of Qt it finishes.

                        I copy here the code I have, just if it helps

                        QProcess proc;
                        proc.setWorkingDirectory("/home/grullo/isoXmipp/");
                        QString cmdline = ". /home/grullo/xmip-bundle/build/xmipp.bashrc";
                        QString xmipCmdLine;
                        createXmippScript(xmipCmdLine);
                        cmdline = cmdline + "; " + xmipCmdLine;
                        std::cout << cmdline.toStdString() << std::endl;
                        proc.start("bash", QStringList() << "-c" <<cmdline);
                        proc.waitForFinished();

                        QString StdOut = proc.readAllStandardOutput(); //Reads standard output
                        ui->consoleOutput->setText(StdOut);
                        cout<<"\n standard output..........\n";
                        cout<<endl<<StdOut.toStdString();

                        cout<<"\n standard error..........\n";
                        QString StdError = proc.readAllStandardError(); //Reads standard error
                        cout<<endl<<StdError.toStdString();

                        Thanks in advance

                        P Offline
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                        Pablo J. Rogina
                        wrote on 21 Apr 2020, 01:31 last edited by
                        #17

                        @grullo said in Run command line from Qt app in linux:

                        QString cmdline = ". /home/grullo/xmip-bundle/build/xmipp.bashrc";

                        I guess the initial dot (".") is making your command line relative, so that path is not found when set the working directory.

                        In addition, it'd be useful if you handle signal errorOccurred as it helps knowing about any possible error.

                        Upvote the answer(s) that helped you solve the issue
                        Use "Topic Tools" button to mark your post as Solved
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                        J 1 Reply Last reply 21 Apr 2020, 06:26
                        2
                        • P Pablo J. Rogina
                          21 Apr 2020, 01:31

                          @grullo said in Run command line from Qt app in linux:

                          QString cmdline = ". /home/grullo/xmip-bundle/build/xmipp.bashrc";

                          I guess the initial dot (".") is making your command line relative, so that path is not found when set the working directory.

                          In addition, it'd be useful if you handle signal errorOccurred as it helps knowing about any possible error.

                          J Offline
                          J Offline
                          JonB
                          wrote on 21 Apr 2020, 06:26 last edited by JonB
                          #18

                          @Pablo-J-Rogina
                          Hi Pablo. It's not what you say. If you read the discussion so far, you will discover that the OP's command-line (passed to bash -c) is deliberately:

                          . /home/grullo/xmip-bundle/build/xmipp.bashrc
                          

                          There is a space after the dot. That is a bash/sh command which is a synonym for source, and reads the following argument as a file of commands into bash to be executed. Personally, while . command may be convenient for typing at the keyboard, I would always use source in a program/script for clarity.

                          @grullo
                          First, please do as @Pablo-J-Rogina asks and put a slot on errorOccurred signal. Please also check (and debug out) the return result from proc.waitForFinished();. Do yourself a favour, especially if you having a problem and trying to debug, always check documentation for functions having return results/error indicators and use them.

                          The implication of the error message you see is that you have allowed the QProcess proc; variable to go out of scope while the process is still running. I don't see how that would arise from the code as shown, but there you are. If it were me, I'd try some other command-lines and see whether you always get this or whether it's only with your particular command.

                          Ah, hang on. bool QProcess::waitForFinished(int msecs = 30000) times out by default after 30 seconds if not finished. You don't say anything, but I guess you have to wait 30 seconds and then you get the error? (You would have seen this from printing its return result, as I said above, please show us that.) In that case, your code will read any output and then proc will be destroyed. Your sub-process will still be running though, and you will get the message you see. Is that it? Assuming so, you need to decide what you're going to do if the process does not run to conclusion in 30 seconds. That is the most obvious explanation to me of what must be happening? You really ought not be using waitForFinished(), and instead be doing it with signals and slots....

                          P 1 Reply Last reply 21 Apr 2020, 12:30
                          2
                          • J JonB
                            21 Apr 2020, 06:26

                            @Pablo-J-Rogina
                            Hi Pablo. It's not what you say. If you read the discussion so far, you will discover that the OP's command-line (passed to bash -c) is deliberately:

                            . /home/grullo/xmip-bundle/build/xmipp.bashrc
                            

                            There is a space after the dot. That is a bash/sh command which is a synonym for source, and reads the following argument as a file of commands into bash to be executed. Personally, while . command may be convenient for typing at the keyboard, I would always use source in a program/script for clarity.

                            @grullo
                            First, please do as @Pablo-J-Rogina asks and put a slot on errorOccurred signal. Please also check (and debug out) the return result from proc.waitForFinished();. Do yourself a favour, especially if you having a problem and trying to debug, always check documentation for functions having return results/error indicators and use them.

                            The implication of the error message you see is that you have allowed the QProcess proc; variable to go out of scope while the process is still running. I don't see how that would arise from the code as shown, but there you are. If it were me, I'd try some other command-lines and see whether you always get this or whether it's only with your particular command.

                            Ah, hang on. bool QProcess::waitForFinished(int msecs = 30000) times out by default after 30 seconds if not finished. You don't say anything, but I guess you have to wait 30 seconds and then you get the error? (You would have seen this from printing its return result, as I said above, please show us that.) In that case, your code will read any output and then proc will be destroyed. Your sub-process will still be running though, and you will get the message you see. Is that it? Assuming so, you need to decide what you're going to do if the process does not run to conclusion in 30 seconds. That is the most obvious explanation to me of what must be happening? You really ought not be using waitForFinished(), and instead be doing it with signals and slots....

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                            Pablo J. Rogina
                            wrote on 21 Apr 2020, 12:30 last edited by
                            #19

                            @JonB said in Run command line from Qt app in linux:

                            There is a space after the dot. That is a bash/sh command which is a synonym for source,

                            you're right. That's the problem to post an answer at midnight...

                            Upvote the answer(s) that helped you solve the issue
                            Use "Topic Tools" button to mark your post as Solved
                            Add screenshots via postimage.org
                            Don't ask support requests via chat/PM. Please use the forum so others can benefit from the solution in the future

                            J 1 Reply Last reply 21 Apr 2020, 13:03
                            0
                            • P Pablo J. Rogina
                              21 Apr 2020, 12:30

                              @JonB said in Run command line from Qt app in linux:

                              There is a space after the dot. That is a bash/sh command which is a synonym for source,

                              you're right. That's the problem to post an answer at midnight...

                              J Offline
                              J Offline
                              JonB
                              wrote on 21 Apr 2020, 13:03 last edited by
                              #20

                              @Pablo-J-Rogina
                              :) It's also why choosing to write source rather than . would make it clearer for the OP and anyone reading the code :)

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                                grullo
                                wrote on 28 Apr 2020, 16:52 last edited by
                                #21

                                Thanks for your replies, I'm sorry for the delay in my response. This week we had a peak of work.

                                Fortunately I could fix it with startDetached. I'm not sure exactly, why doing this the script runs until finishing, but it's working.

                                Kind regards

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